Create and finalize a bulk assembly

Dev

POST

https://{tenant_name}.benchling.com/api/v2-alpha/assemblies:create-and-finalize

POST

/api/v2-alpha/assemblies:create-and-finalize

curl -X POST https://{tenant_name}.benchling.com/api/v2-alpha/assemblies:create-and-finalize \
     -H "Authorization: Bearer <token>" \
     -H "Content-Type: application/json" \
     -d '{
  "assemblyParameters": {
    "type": "GOLDEN_GATE",
    "parameters": {
      "fragmentProductionMethod": "EXISTING_CUT_SITES",
      "type2SRestrictionEnzymeId": "enz_Z1fxwlBi"
    }
  },
  "bins": [
    {
      "binType": "FRAGMENT",
      "id": "string",
      "name": "string"
    }
  ],
  "constructs": [
    {
      "fragments": [
        "string"
      ],
      "id": "string"
    }
  ],
  "fragments": [
    {
      "end": 1.1,
      "id": "string",
      "orientation": "FORWARD",
      "polymer": {
        "polymerType": "NUCLEOTIDE_SEQUENCE",
        "sequenceId": "seq_123"
      },
      "start": 1.1,
      "binId": "bin1"
    }
  ],
  "topology": "CIRCULAR",
  "folderId": "string",
  "name": "string",
  "outputLocation": {
    "constructFolderId": "string"
  }
}'

{
  "taskId": "string"
}

Create and finalize a new bulk assembly in a single step.

Authentication

AuthorizationBearer

Bearer authentication of the form Bearer <token>, where token is your auth token.

Request

Additional information required when creating and finalizing a bulk assembly.

assemblyParametersobjectRequired

Assembly-wide parameters to describe requirements and procedures for the assembly.

binslist of objectsRequired

Bins are used to group fragments according to their position in the output construct or add a spacer (i.e. constant) region.

constructslist of objectsRequired

Output constructs that should be created.

fragmentslist of objectsRequired

Fragments to be used in the assembly.

topologyenumRequired

Whether the created constructs should be circular or linear.

Allowed values:

folderIdstringRequired

API identifier of the folder in which the assembly should be created.

namestringRequired

Name of the bulk assembly.

outputLocationobjectRequired

Response

This endpoint launches a long-running task and returns the Task ID of the launched task. The task response contains a finalized bulk assembly.

taskIdstringOptional

Errors

400

Bad Request Error