Validate a bulk assembly

Dev

POST

https://{tenant_name}.benchling.com/api/v2-alpha/assemblies:validate

POST

/api/v2-alpha/assemblies:validate

curl -X POST https://{tenant_name}.benchling.com/api/v2-alpha/assemblies:validate \
     -H "Authorization: Bearer <token>" \
     -H "Content-Type: application/json" \
     -d '{
  "assemblyParameters": {
    "type": "GOLDEN_GATE",
    "parameters": {
      "fragmentProductionMethod": "EXISTING_CUT_SITES",
      "type2SRestrictionEnzymeId": "enz_Z1fxwlBi"
    }
  },
  "bins": [
    {
      "binType": "FRAGMENT",
      "id": "string",
      "name": "string"
    }
  ],
  "constructs": [
    {
      "fragments": [
        "string"
      ],
      "id": "string"
    }
  ],
  "fragments": [
    {
      "end": 1.1,
      "id": "string",
      "orientation": "FORWARD",
      "polymer": {
        "polymerType": "NUCLEOTIDE_SEQUENCE",
        "sequenceId": "seq_123"
      },
      "start": 1.1,
      "binId": "bin1"
    }
  ],
  "topology": "CIRCULAR"
}'

{
  "taskId": "string"
}

Validate an assembly prior to finalization to see if it will succeed.

Authentication

AuthorizationBearer

Bearer authentication of the form Bearer <token>, where token is your auth token.

Request

This endpoint expects an object.

assemblyParametersobjectRequired

Assembly-wide parameters to describe requirements and procedures for the assembly.

binslist of objectsRequired

Bins are used to group fragments according to their position in the output construct or add a spacer (i.e. constant) region.

constructslist of objectsRequired

Output constructs that should be created.

fragmentslist of objectsRequired

Fragments to be used in the assembly.

topologyenumRequired

Whether the created constructs should be circular or linear.

Allowed values:

Response

This endpoint launched a long-running task and returns the Task ID of the launched task. The task response contains a set of validation results.

taskIdstringOptional

Errors

400

Bad Request Error